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Abstract : Localization Analysis of Natural Toxin of Solanum tuberosum L. via Mass Spectrometric Imaging
Localization Analysis of Natural Toxin of Solanum tuberosum L. via Mass Spectrometric Imaging DOI: http://dx.doi.org/10.6000/1927-3037.2016.05.01.1 Published: 02 March 2016 |
Abstract: The use of mass spectrometry imaging (MSI) revealed the localization of a-solanine and a-chaconine as natural toxins for Potato (Solanum tuberosum L.). The content of Potato glycoalkaloids, a-solanine and a-chaconine, were quantitatively determined by high performance liquid chromatography (HPLC). Matrix assisted laser desorption/ionization-based tandem mass spectrometry (MS) could determine a-solanine and a-chaconine from raw potato extraction and section. After budbreak, a-solanine and a-chaconine were produced and localized at periderm and germ compared with that before budbreak. At germ region, these glycoalkaloids did not exist whole germ region but eccentrically localize at germ surface and central region. The amount of a-chaconine was twofold higher than a-solanine at periderm. At germ region, there was no difference between these toxins. Keywords: Food safety, glycoalkaloid, mass spectrometry imaging, a-solanine, a-chaconine.Download Full Article |
Abstract : Identification of Acid Mine Drainage Microorganisms from a Coal Mine in South Africa
Identification of Acid Mine Drainage Microorganisms from a Coal Mine in South Africa DOI: http://dx.doi.org/10.6000/1927-3037.2016.05.01.2 Published: 02 March 2016 |
Abstract: Acid mine drainage (AMD) generated from mining processes is an on-going environmental concern. This study aimed to identify microorganisms (MOs) from a coal mine water source to determine organism diversity for its use as a bioremediation method of AMD contaminated sources. For the purpose of this study, a culture-dependent sample, previously collected from an open-mine-water-pit was used to assess the microbial community by 18S rRNA gene amplification and BLAST analysis. The analysis revealed the presence of 94 MOs, with 3 dominant MOs namely, Cercozoan; an uncultured bacterium and Chorella vulgaris. The use of this culture is not promising as the presence of Cercozoan, a protist type body will target other species for its own survival, hence inhibiting any positive effect the algae or bacteria may have on bioremediation potential of harmful AMD elements. Keywords: Acid mine drainage, Gene amplification, Cercozoan, Bacteria, Algae.Download Full Article |
Abstract : Production and Characterization of Phospholipases C from some Bacillus thuringiensis Isolates Recovered from Egyptian Soil
Production and Characterization of Phospholipases C from some Bacillus thuringiensis Isolates Recovered from Egyptian Soil DOI: http://dx.doi.org/10.6000/1927-3037.2016.05.01.3 Published: 02 March 2016 |
Abstract: Two hundred and thirty one isolates, with the characteristic morphology of Genus Bacillus, were recovered from 100 soil samples collected from 7 different Egyptian governorates, and were screened for phospholipase C (PLC) production by egg-yolk plate method. Sixty isolates have shown very high PLC production and were further assessed using chromogenic assay method. The highest five producers, identified by 16S rRNA gene sequencing as Bacillus thuringiensis, were selected and their PLCs were purified to homogeneity using ammonium sulfate precipitation and Sephadex G-75 gel filtration chromatography. PLCs had molecular masses of 28.5 kDa as indicated by SDS-PAGE. The characteristics of the studied five PLCs were having maximal activities at 35-45°C and pH 7.2. The enzymes could retain more than half of their maximum activities at 30-60°C and pH 7-8. Equivalent activities were recorded at low water tension. PLC from B. thuringiensis KT159186 was relatively thermostable with a maximum activity at 40°C. The half-inactivation temperature was above 50°C, which compared favorably to that of other enzymes. Activity at the wide temperature range (20-80°C) was high (about 50% of maximum),. This PLC could tolerate pH as high as 12 with only 30% loss of activity. Specificity pattern of PLC from the same isolate showed equivalent activities toward phosphatidylcholine and phosphatidylinositol in addition to marked activity toward phosphatidylethanolamine, which makes it a typical non-specific PLC for industrial purposes. In conclusion, these characteristics of PLC from the test isolate make it attractive for various industrial applications. Keywords: Phospholipase C, Bacillus thuringiensis, Purification, Chracterization.Download Full Article |
Abstract : Sorbed Anthracene Degradation by Sophorolipid Producing Yeasts
Sorbed Anthracene Degradation by Sophorolipid Producing Yeasts DOI: http://dx.doi.org/10.6000/1927-3037.2016.05.01.4 Published: 02 March 2016 |
Abstract: The organic pollutan adsorption/desorption process by microbial degradation had been less studied than metal ones. The sorption assays alone did not predict desorption, due to hysteresis, irreversibility, fixed compounds in different sites, with diverse desorption rates. Most of the studies dealt with bacteria rather than filamentous fungi and yeasts. So, our aims were to isolate yeasts from polluted sediments, to quantify its potential to uptake anthracene (An) and to evaluate the bioavailability by a desorption model. Yeasts were isolated from hydrocarbon-polluted samples, 40-isolates grew in anthracene-plates. Molecular characterization was achieved by sequence analysis of the ITS1-5.8S rRNA-ITS4 and 26S rRNA regions; morphological and physiological determination were also done. Candida parasilopsis, Pichia anomala and Rhodothorula mucilaginosa were the prevalent yeasts. An-degradation was assessed in soil-systems with 0, 50, 100, 150, 200 and 250 μg An/l, 3 differentes sorbens types, organic carbon, organic nitrogen, PAHs, sand:silt:clay, pH and cation exchange capacity. Sophorolipids excretion were confirmed by HPLC, UV-detector with active fraction at 9.669 min (RT 9.646 min = sophorolipid-standard). A desorption model with equilibrium, nonequilibrium and nondesorption areas, was applied to explain the experimental data, An-transformation was greater in the organic liquid-phase than in the soil-sorbed ones; the desorption-coefficients and soil components were negatively correlated with the kinetic parameters. The An-release depended on the sophorolipid excretion, soil matrix and particles sizes. Desorption parameters significantly fitted the yeast uptake, with R2 = 0.97, R2 = 0.90 and R2 = 0.97 for C. parasilopsis, P. anomalaand R. mucilaginosa, respectively. Keywords: Anthracene, bioavailability, biodegradation, Candida parasilopsis,desorption model Pichia anomala, Rhodothorula mucilaginosa, sophorolipid.Download Full Article |